BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017A10SP1|AL427104
(973 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig288 1879 0.0
>3x_Contig288
Length = 1699
Score = 1879 bits (947), Expect = 0.0
Identities = 968/971 (99%), Gaps = 3/971 (0%)
Strand = Plus / Plus
Query: 1 gatccctgncatcaaagataccttgtgcttgtaagaaccgctttaaactttcgaatatga 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gatccctg-catcaaagataccttgtgcttgtaagaaccgctttaaactttcgaatatga 335
Query: 61 tgtaggccggagcaccgagtatactgactcgaaggaatttcgcggtcatatggattaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgtaggccggagcaccgagtatactgactcgaaggaatttcgcggtcatatggattaatt 395
Query: 121 ctggttcatgcggcattactaaggtcaacaatgtttcagaccaccaccatataaatccga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctggttcatgcggcattactaaggtcaacaatgtttcagaccaccaccatataaatccga 455
Query: 181 acggtatgaatactgtaaatgaaaacatgatacagcgctgcatgtgaacaccaacactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 acggtatgaatactgtaaatgaaaacatgatacagcgctgcatgtgaacaccaacactgt 515
Query: 241 aataattcccagatccgtag-ctaatggacatagtgtatccaaactcgtggctatacctt 299
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aataattcccagatccgtaggctaatggacatagtgtatccaaactcgtggctatacctt 575
Query: 300 caaagatagcatacgtaatgtttgtggtcattgaagccaaagagaccgctgccaattctg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 caaagatagcatacgtaatgtttgtggtcattgaagccaaagagaccgctgccaattctg 635
Query: 360 tcctccccaaatgacccaccgttaacgagcataccacggggaacatctgttccaataaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tcctccccaaatgacccaccgttaacgagcataccacggggaacatctgttccaataaga 695
Query: 420 aagtgaaaatcaatgggattgaatacgatgccaacactttgagttcactatttgcggtta 479
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 696 aagtgaaaatcaatgggattgaatacgatgccaacactttgagtt-actatttgcggtta 754
Query: 480 ctttagcatggcttaaatcttcttctttcatgctgcccacatcttgaaatacctgcggta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ctttagcatggcttaaatcttcttctttcatgctgcccacatcttgaaatacctgcggta 814
Query: 540 ctgaacctcgactagttactgatattagcgacccacgtctcctgttgggaccgcctgcac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 ctgaacctcgactagttactgatattagcgacccacgtctcctgttgggaccgcctgcac 874
Query: 600 cactaccgccagcaccacctgcatatgctctatcatggaagtcttgttgcaattgctgtc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 cactaccgccagcaccacctgcatatgctctatcatggaagtcttgttgcaattgctgtc 934
Query: 660 tgacccggtgcataaagtcgtcatatgctattacatccgcttgttctgaggtcccattct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 tgacccggtgcataaagtcgtcatatgctattacatccgcttgttctgaggtcccattct 994
Query: 720 caaggtcctcatcttcgtcgttctcactgttctgcgatgatgagaaccttctctcgtgct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 caaggtcctcatcttcgtcgttctcactgttctgcgatgatgagaaccttctctcgtgct 1054
Query: 780 cctctaagagccaatcaagattttgttgtgatacgttgcttggttctgataccctcgagg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 cctctaagagccaatcaagattttgttgtgatacgttgcttggttctgataccctcgagg 1114
Query: 840 gcaatgacaccgtccgacttaagggttctccgtcctcatcgtactcatctatatcttcca 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1115 gcaatgacaccgtccgacttaagggttctccgtcctcatcgtactcatctatatcttcca 1174
Query: 900 aaacttcgtctaaatcgtcgtaaacagacggttctctaacactgcttccaaaatcctcat 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1175 aaacttcgtctaaatcgtcgtaaacagacggttctctaacactgcttccaaaatcctcat 1234
Query: 960 ccaaagtgtga 970
|||||||||||
Sbjct: 1235 ccaaagtgtga 1245
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5909
Number of Sequences: 1807
Number of extensions: 5909
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)